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Rhizosphere immunity: targeting the underground for sustainable plant health management

Zhong WEI, Ville-Petri FRIMAN, Thomas POMMIER, Stefan GEISEN, Alexandre JOUSSET, Qirong SHEN

Frontiers of Agricultural Science and Engineering 2020, Volume 7, Issue 3,   Pages 317-328 doi: 10.15302/J-FASE-2020346

Abstract:

Managing plant health is a great challenge for modern food production and is further complicated by the lack of common ground between the many disciplines involved in disease control. Here we present the concept of rhizosphere immunity, in which plant health is considered as an ecosystem level property emerging from networks of interactions between plants, microbiota and the surrounding soil matrix. These interactions can potentially extend the innate plant immune system to a point where the rhizosphere immunity can fulfil all four core functions of a full immune system: pathogen prevention, recognition, response and homeostasis. We suggest that considering plant health from a meta-organism perspective will help in developing multidisciplinary pathogen management strategies that focus on steering the whole plant-microbe-soil networks instead of individual components. This might be achieved by bringing together the latest discoveries in phytopathology, microbiome research, soil science and agronomy to pave the way toward more sustainable and productive agriculture.

Keywords： rhizosphere     soil microbiome     plant immunity     microbial ecology     plant health     soilborne pathogens    

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IMPACTS OF CLIMATE CHANGE ON CROP PRODUCTION, PESTS AND PATHOGENS OF WHEAT AND RICE

Frontiers of Agricultural Science and Engineering 2022, Volume 9, Issue 1,   Pages 4-18 doi: 10.15302/J-FASE-2021432

Abstract:

Ongoing climate change is expected to have impacts on crops, insect pests, and plant pathogens andThen, the effects of climate change on pests and pathogens related with wheat and rice, and their interactionsthe direct impacts of climate change on crops, and the indirect impacts on crops through pests and pathogens

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PathogenTrack and Yeskit: tools for identifying intracellular pathogens from single-cell RNA-sequencing

Frontiers of Medicine 2022, Volume 16, Issue 2,   Pages 251-262 doi: 10.1007/s11684-021-0915-9

Abstract: However, the cellular distributions of pathogens and their impact on host cells remain rarely exploredStill, the tools used to interpret pathogens (such as viruses, bacteria, and fungi) at the single-cell, a python-based computational pipeline that uses unmapped scRNA-seq data to identify intracellular pathogens

Keywords： scRNA-seq     intracellular pathogen     microbe     COVID-19     SARS-CoV-2    

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Effect of the ultraviolet/chlorine process on microbial community structure, typical pathogens, and antibiotic

Frontiers of Environmental Science & Engineering 2022, Volume 16, Issue 8, doi: 10.1007/s11783-022-1521-z

Abstract:

• UV/chlorine can effectively remove VBNC pathogens, ARGs and MGEs in

Keywords： UV/chlorine process     Pathogen     Antibiotic resistance genes     High-throughput qPCR     Reclaimed water    

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., foodborne pathogens threatening neonates and infants

Qiming CHEN, Yang ZHU, Zhen QIN, Yongjun QIU, Liming ZHAO

Frontiers of Agricultural Science and Engineering 2018, Volume 5, Issue 3,   Pages 330-339 doi: 10.15302/J-FASE-2018208

Abstract: (formerly Enterobacter sakazakii) are special foodborne pathogens.Therefore, Cronobacter spp. have become serious pathogens of neonates and infants, as well as

Keywords： Cronobacter spp.     desiccation resistance     pathogen control     pathogen detection     powdered infant formula    

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Mitigating microbiological risks of potential pathogens carrying antibiotic resistance genes and virulence

Frontiers of Environmental Science & Engineering 2023, Volume 17, Issue 7, doi: 10.1007/s11783-023-1682-4

Abstract:

● Abundance of MAGs carrying ARG-VF pairs unchanged in rivers after WWTP upgrade.

Keywords： Wastewater treatment plant upgrade     Antibiotic resistance genes (ARGs)     Virulence factors (VFs)     Gene co-occurrence     Genome-centric analysis    

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Hydrothermal carbonization of livestock mortality for the reduction of pathogens and microbially-derived

Thomas F. Ducey, Jessica C. Collins, Kyoung S. Ro, Bryan L. Woodbury, D. Dee Griffin

Frontiers of Environmental Science & Engineering 2017, Volume 11, Issue 3, doi: 10.1007/s11783-017-0930-x

Abstract: utilizing high temperature and pressure, has the potential to treat agricultural waste via inactivating pathogenstreatment can be reintroduced in agricultural environments where it could potentially be passed to pathogenspotential HTC treatment recommendations for livestock mortality when considering the elimination of pathogens

Keywords： High-temperature carbonization     Microbial DNA     Livestock mortality    

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Association between heavy metals and antibiotic-resistant human pathogens in environmental reservoirs

Christine C. Nguyen, Cody N. Hugie, Molly L. Kile, Tala Navab-Daneshmand

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1129-0

Abstract:

Heavy metals can act as co-selecting agents and promote antibiotic resistance.

Most frequent resistances to heavy metals are observed for zinc and cadmium.

P. aeruginosa and E. coli are commonly resistant to heavy metals and antibiotics.

Heavy metals proliferate antibiotic resistance through co- and cross-resistance.

Heavy metal and antibiotic resistances are common near anthropogenic activities.

Keywords： Zinc     Cadmium     Copper     Lead     E. coli     P. aeruginosa    

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Plant Pathogens Utilize Effectors to Hijack the Host Endoplasmic Reticulum as Part of Their Infection

Maofeng Jing, Yuanchao Wang

Engineering 2020, Volume 6, Issue 5,   Pages 500-504 doi: 10.1016/j.eng.2020.03.003

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Antibodies Targeting a Conserved Surface Polysaccharide Are Protective Against a Wide Range of Microbial Pathogens

Xi Lu,Guoqing Li,Jing Pang,Xinyi Yang,Colette Cywes-Bentley,Xuefu You,Gerald B. Pier,

Engineering doi: 10.1016/j.eng.2023.09.012

Abstract: The β-1–6-linked poly-N-acetylglucosamine (PNAG) polymer is a conserved surface polysaccharide produced by many bacteria, fungi, and protozoan (and even filarial) parasites. This wide-ranging expression makes PNAG an attractive target for vaccine development, as it potentially encompasses a broad range of microorganisms. Significant progress has been made in discovering important properties of the biology of PNAG expression in recent years. The molecular characterization and regulation of operons for the production of PNAG biosynthetic proteins and enzymes have been studied in many bacteria. In addition, the physiological function of PNAG has been further elucidated. PNAG-based vaccines and PNAG-targeting antibodies have shown great efficacy in preclinical research. Furthermore, clinical tests for both vaccines and antibodies have been carried out in humans and economically important animals, and the results are promising. Although it is not destined to be a smooth road, we are optimistic about new vaccines and immunotherapeutics targeting PNAG becoming validated and eventually licensed for clinical use against multiple infectious agents.

Keywords： Poly-     N     -acetylglucosamine     Conjugate vaccine     Monoclonal antibody    

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species associated with eucalypt diseases in southern China

Shuaifei CHEN, Qianli LIU, Guoqing LI, Michael J. WINGFIELD

Frontiers of Agricultural Science and Engineering 2017, Volume 4, Issue 4,   Pages 433-447 doi: 10.15302/J-FASE-2017173

Abstract: The genus includes several important pathogens of species of and , mainly causing leaf and shoot

Keywords： Corymbia     Eucalyptus     forest pathogens     plantations     Myrtaceae    

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Progress on the Detection Technology of Bacterial Pathogens in Marine Aquaculture

Xiao Jingfan,Wang Yue,Zhang Yuanxing,Lei Jilin

Strategic Study of CAE 2014, Volume 16, Issue 9,   Pages 10-15

Abstract:

With the rapid developments in marine aquaculture, the bacterial pathogen has been recognized as a serious cause of disease. The urgency of implementing diagnosis to control the spread of bacterial disease and safety of aquaculture products is presently the dominant issue to be concerned. The aim of this review is to compile the dispersed literature published about different aspects of the detection technology of bacterial diseases occurring in aquaculture worldwide. The current status in the development of rapid diagnosis of aquaculture bacterial diseases will provide useful information on the establishment of detection standards and development of diagnosis products.

Keywords： Marine aquaculture     bacterial pathogen     detection technology    

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The preparation and application of inactivated vaccine and its antiserum from eight common pathogens

Gan Lingling,Wang Weifang,Gao Chunren,Lei Jilin

Strategic Study of CAE 2014, Volume 16, Issue 9,   Pages 21-25

Abstract:

In this study, formal dehyde was used to inactivate Edwardsiella tarda, Vibrio anguillarum, Vibrio harveyi, Vibrio vulnificus, Vibrio alginolyticus, Aeromonas caviae, Edwardsiella ictaluri, Aeromonas hydrophila, in order to preparethe inactivated vaccine. Then vaccine was used to immune turbot by intramuscular injection. In this way ,we got the antiserum of all bacterium above. Enzyme-linked immunosorbent assay was used to determine the content of antibody in serum. The antibody can be detect after four week in the immune, and the level of antibody is research highest in the tenth week which is inoculated inactivated vaccine of Edwardsiella tarda, and the highest titer of other vaccines are 1:102400, 1:6400, 1:6400, 1:12800, 1:12800, 1:6400, 1:6400, 1:12800. The results of cross reaction of the bacteria and their anti-serum shows that the effect is most intense when the bacteria react with its own antiserum, and it is very weak when the bacteria react with other antiserum.

Keywords： Flatfish     Vaccine     Antiserum     pathogen    

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State of Science: Why Does Rework Occur in Construction? What Are Its Consequences? And What Can be Done to Mitigate Its Occurrence? Review

Peter E.D. Love, Jane Matthews, Michael C.P. Sing, Stuart R. Porter, Weili Fang

Engineering 2022, Volume 18, Issue 11,   Pages 246-258 doi: 10.1016/j.eng.2022.05.010

Abstract:

There has been a wealth of research that has examined the nature of rework in construction. Progress toward addressing the rework problem has been limited—it still plagues practice, adversely impacting a project's performance. Almost all rework studies have focused on determining its proximal or root causes and therefore have overlooked the conditions that result from its manifestation. In filling this void, this paper draws upon our previous empirical studies, amongst others, to provide a much-needed theoretical framing to understand better why rework occurs, what its consequences are, and how it can be mitigated during construction. The theoretical framing we derive from our review provides construction organizations and their projects with a realization that the journey to mitigating rework begins with creating an error-mastery culture comprising authentic leadership, psychological safety, an errormanagement orientation, and resilience. We suggest that, once an error-mastery culture is established within construction organizations and their projects, they will be better positioned to realize the benefits of the techniques, tools, and technologies espoused to address rework, such as the Last Planner® and building information modeling. We also provide directions for future research and identify implications for practice so that strides toward rework mitigation in construction can be made. 

Keywords： Construction     Errors     Error-mastery culture     Pathogens     Rework     Violations    

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Title Author Date Type Operation

Rhizosphere immunity: targeting the underground for sustainable plant health management

Zhong WEI, Ville-Petri FRIMAN, Thomas POMMIER, Stefan GEISEN, Alexandre JOUSSET, Qirong SHEN

Journal Article

IMPACTS OF CLIMATE CHANGE ON CROP PRODUCTION, PESTS AND PATHOGENS OF WHEAT AND RICE

Journal Article

PathogenTrack and Yeskit: tools for identifying intracellular pathogens from single-cell RNA-sequencing

Journal Article

Effect of the ultraviolet/chlorine process on microbial community structure, typical pathogens, and antibiotic

Journal Article

., foodborne pathogens threatening neonates and infants

Qiming CHEN, Yang ZHU, Zhen QIN, Yongjun QIU, Liming ZHAO

Journal Article

Mitigating microbiological risks of potential pathogens carrying antibiotic resistance genes and virulence

Journal Article

Hydrothermal carbonization of livestock mortality for the reduction of pathogens and microbially-derived

Thomas F. Ducey, Jessica C. Collins, Kyoung S. Ro, Bryan L. Woodbury, D. Dee Griffin

Journal Article

Association between heavy metals and antibiotic-resistant human pathogens in environmental reservoirs

Christine C. Nguyen, Cody N. Hugie, Molly L. Kile, Tala Navab-Daneshmand

Journal Article

Plant Pathogens Utilize Effectors to Hijack the Host Endoplasmic Reticulum as Part of Their Infection

Maofeng Jing, Yuanchao Wang

Journal Article

Antibodies Targeting a Conserved Surface Polysaccharide Are Protective Against a Wide Range of Microbial Pathogens

Xi Lu,Guoqing Li,Jing Pang,Xinyi Yang,Colette Cywes-Bentley,Xuefu You,Gerald B. Pier,

Journal Article

species associated with eucalypt diseases in southern China

Shuaifei CHEN, Qianli LIU, Guoqing LI, Michael J. WINGFIELD

Journal Article

Progress on the Detection Technology of Bacterial Pathogens in Marine Aquaculture

Xiao Jingfan,Wang Yue,Zhang Yuanxing,Lei Jilin

Journal Article

The preparation and application of inactivated vaccine and its antiserum from eight common pathogens

Gan Lingling,Wang Weifang,Gao Chunren,Lei Jilin

Journal Article

State of Science: Why Does Rework Occur in Construction? What Are Its Consequences? And What Can be Done to Mitigate Its Occurrence?

Peter E.D. Love, Jane Matthews, Michael C.P. Sing, Stuart R. Porter, Weili Fang

Journal Article